Files are available under licenses specified on their description page. Foxtail millet setaria italica and common millet panicum miliaceum are the oldest domesticated dry farming crops in eurasia. Expression of 1891 genes was altered, including 18 upregulated genes and 573 down. It is the secondmost widely planted species of millet, and the most grown millet species in asia. Dinitroaniline herbicide crossresistance in resistant setaria italica lines selected from interspecific cross with s. View enhanced pdf access article on wiley online library html view download pdf for offline viewing. Setaria italica and its wild ancestor setaria viridis are diploid c 4 grasses with small genomes of. In addition, users can learn about the location of vouchered specimens and see images to get a better visual for each plant. Compared to other gramineous crops, it has relatively stronger drought and lower. Phosphorus p is an essential element which plays several key roles in all living organisms.
Both species have attributes that make them attractive as model systems. Yuan liu school of life sciences and state key laboratory of agrobiotechnology, the chinese university of hong kong, hong kong, china. Setaria, a member of the grass subfamily panicoideae, tribe paniceae is closely related to other paniceae, including switchgrass, proso. Smithsonian institution, hosted by the usdanrcs plants database. B the motif analysis page for motif scans and signi. Setaria italica coarse droughtresistant annual grass grown for grain, hay, and forage in europe and asia and chiefly for forage and hay in united.
Consultative group on international agricultural research cgiar, research. Setaria viridis green foxtail is one of the worlds most widespread weeds, and its small size, native variation. Pdf genomewide characterization of microrna in foxtail. Setaria italica definition of setaria italica by the free. Holecross test, ethanolic extracts of setaria italica at 400 mgkg body weight dose have prominent cns depressant activity which is. Advances in molecular genetics and genomics had identified several potential genes in this.
Frontiers generation and characterization of a foxtail. Generation and characterization of a foxtail millet setaria. Phytoliths analysis for the discrimination of foxtail. Italian millet, italian foxtail, german millet, siberian millet, foxtail bristlegrass, foxtailmillet. Oct 16, 2012 potential hypoglycaemic effects of insoluble fibres isolated from foxtail millets setaria italica l. Thus, the availability of genome sequence soon will not be a limiting factor in developing. However, the mechanism of foxtail millet tolerance to lownitrogen stress is still unknown. Early identification of salt tolerant foxtail millet setaria italica l.
Insoluble fibres were isolated from the two varieties of foxtail millet white and. Dhns in setaria italica and zea mays, but 6 in sorghum bicolor. A cluster analysis of 2907 accessions of foxtail millet setaria italica l. Setaria viridis green foxtail is one of the worlds most. Media in category setaria italicathe following 31 files are in this category, out of 31 total. In countries with an arid or semiarid climate, millet is a staple crop of significant economic importance, taking the place of wheat and corn.
Media in category setaria italica the following 31 files are in this category, out of 31 total. In this study, the transcriptome of foxtail millet under lownitrogen stress was systematically analyzed. Download plants data complete plants checklist state plants checklist. Flora category vascular exotic structural class grasses nvs code. Foxtail millet setaria italica is a member of the poaceae grasses that was initially domesticated from the wild species of s. May, 2012 foxtail millet setaria italica, a member of the poaceae grass family, is an important food and fodder crop in arid regions and has potential for use as a c 4 biofuel. Isozyme analysis of genetic diversity and population genetic structure in setaria viridis.
Setaria italica foxtail millet is a grain crop widely grown in asia with particular significance in semiarid regions of northern china. Setaria viridis and setaria italica, model genetic systems. Instabilite chromosomique dans les tissus somatiques des descendants dun hybride interspecifique setaria verticillata p. Return to article details agromorphological characterisation of foxtail millet setaria italica l. Foxtail millet setaria italica is one of the oldest domesticated cereal crops in eurasia, but identifying foxtail millets, especially in charred grains, and differentiating it from its wild ancestor, green foxtail setaria viridis, in the archaeobotanical remains, is still problematic. Setaria italica is a grain crop widely grown in northern china and india that is closely related to the major food and feed crops maize and sorghum. A taxonomic species within the family poaceae foxtail millet, a common food grain, probably originating in southern china. The naclike transcription factor sinac110 in foxtail millet setaria. The record derives from wcsp data supplied on 20120323 which reports it as an accepted name record 442451 with original publication details.
Setaria italica synonyms, setaria italica pronunciation, setaria italica translation, english dictionary definition of setaria italica. Phytolith analysis for differentiating between foxtail. An efficient agrobacterium mediated genetic transformation. View of agromorphological characterisation of foxtail millet setaria. Pdf setaria viridis and setaria italica, model genetic. Plants profile for setaria italica foxtail millet usda. Its short stature, simple growth requirements, and rapid life cycle will greatly facilitate genetic studies of the c4 grasses. Three species of setaria have been domesticated and. Reference genome sequence of the model plant setaria nature. High concentrations of silicon were detected in the prickle hairs which covered the bristles. Silicon deposition in the inflorescence bristles and. Silicon deposits in the inflorescence bristles subtending each spikelet, and in the macrohairs of foxtail millet setaria italica l. The narrow genetic basis of these two gene pools may be the result of localadaptation. Genome wide identification of orthologous zip genes.
Potential hypoglycaemic effects of insoluble fibres isolated. Bailey classification click on a scientific name below to expand it in the plants classification report. Setaria italica definition of setaria italica by the. It is a true diploid with a relatively small genome of 510 mb. In tropical and subtropical rain forests, tropical and subtropical wet sclerophyll forests, dry. Growth and nitrogen fixation were followed during the life cycle of setaria italica foxtail millet inoculated with azospirillum brasilense in controlledenvironment growth chambers. Potential hypoglycaemic effects of insoluble fibres isolated from foxtail millets setaria italica l. Domestication and improvement in the model c4 grass, setaria.
Identifying these two millets in the archaeobotanical remains are still problematic, especially because the millet grains preserve only when charred. Setaria is a widespread genus of plants in the grass family. Setaria italica foxtail millet is a model species for panacoid. Typical examples of these taxa can be distinguished on the basis that s. Genomewide in silico analysis of dehydrins in sorghum. In countries with an arid or semiarid climate, millet is a staple crop of.
This grass foxtail millet has been cultivated as a cereal in china since ancient times and exists in many races differing in size, shape, and hairiness of the panicle, color of the grain, and length of the bristles. Millet is a true grass or cereal, just like wheat, maize and rice, and a great source of essential nutrients. Setaria is a widespread genus of plants in the grass family the name is derived from the latin word seta, meaning bristle or hair, which refers to the bristly spikelets the genus includes over 100 species distributed in many tropical and temperate regions around the world, and members are commonly known as foxtail or bristle grasses. A the quick search page for gene information, metabolic pathways, and ortholog transformation. All structured data from the file and property namespaces is available under the creative commons cc0 license.
The structure of sifgd displays the main contents of the database. Foxtail millet setaria italica is a small diploid c4 panicoid crop species, whose genome is being sequenced by the joint genome institute jgi of the department of energy. Reference genome sequence of the model plant setaria. It is one of the oldest domesticated crops with archeological remains from 5,500 to 5,900 years bc in northern china. Droughttolerance mechanisms in foxtail millet setaria italica and. Beauv at rampur, chitwan, nepal download download pdf. The plants were fertilized at seeding with a limiting amount of combined nitrogen and maintained with an nfree mineral solution. Foxtail millet setaria italica is a short life cycle c4 plant, with sequenced genome, and a potential model plant for c4 species. Rhizosheath formation and involvement in foxtail millet setaria italica root growth under drought stress tie.
Foxtail millet setaria italica, a member of the poaceae grass family, is an important food and fodder crop in arid regions and has potential for use as a c 4 biofuel. According to archeological evidence, foxtail millet was domesticated from green foxtail approximately 9,000 to 6,000 ybp in china. The new york flora atlas is a source of information for the distribution of plants within the state, as well as information on plant habitats, associated ecological communities, and taxonomy. Setaria italica common name foxtail millet family poaceae authority setaria italica l. During maturation of the plants, substantial nitrogenase activity, measured by. Flora category vascular exotic structural class grasses nvs code setita conservation status not assessed year naturalised 1870 origin unknown but. It is also grown on a moderate scale in other parts of the world as a forage crop. An efficient and improved transformation method for functional genetics studies in s. In vitro regeneration of foxtail millet setaria italica l. Genetics and genomics of setaria andrew doust springer. The results can also be downloaded as a csv file unicode utf8 encoding see status, confidence level, source for. Phytoliths analysis provides a viable method for identifying this important crop.
Rhizosheath formation and involvement in foxtail millet. Pagka karon wala pay siak nga nalista ubos niini niya. Phytolithic analysis provides a meaningful method for identifying this important crop. As part of the systems approach, we have developed and used a genomescale metabolic reconstruction in combination with the use of multiomics technologies to gain more insights into the metabolism of. Foxtail millet setaria italica, which originated in china, has a strong tolerance to low nutrition stresses. Ang setaria italica sakop sa kahenera nga setaria sa kabanay nga poaceae. Rhizosheath formation and involvement in foxtail millet setaria italica.
An improved protocol for efficient transformation and. Mar 25, 2020 setaria italica f a taxonomic species within the family poaceae foxtail millet, a common food grain, probably originating in southern china. Genomewide characterization of microrna in foxtail millet setaria italica. Rather than decades, it will soon be possible to obtain draft genome sequences in a matter of months or weeks eid et al. Genomewide in silico analysis of dehydrins in sorghum bicolor, setaria italica and zea mays and quantitative analysis of dehydrin gene expressions under abiotic stresses in sorghum bicolor. Setaria italica seeds red jewel millet ornamental grass seed. Poaceae update for itis, in cooperation with natureserve, and based on the catalogue of new world grasses database and other sources. The point of disarticulation below the glumes in s. Setaria viridis is a member of the panicoideae clade and is a close relative of several major feed, fuel, and bioenergy grasses. Foxtail millet is distributed in natural and agricultural ecosystems worldwide, and it is grown as a cereal crop for both human food and fodder bettinger et al. Ornamental millet grass is lovely in the mixed border where the rich, reddishbrown foliage and brown, pendulous seed heads give a stunning display.
Recent advances in sequencing technologies are transforming the field of plant science wang et al. Cluster analysis of an international collection of foxtail millet. A simple and robust agrobacteriummediated gene expression system in the c4 panicoid model crop, foxtail millet has been developed with up to 27 % transformation efficiency. Setaria, a member of the grass subfamily panicoideae, tribe paniceae is closely related to other paniceae, including switchgrass, proso millet and pearl millet 16,17,18. The rationale for sequencing foxtail millet is that it is closely related to the bioenergy grasses switchgrass panicum. Oldest evidence of foxtail millet is found along the ancient course of yellow river in cishan, china, carbon dated to be 8700 bc. Structure of the setaria italica functional genome database. Chromosomal instability in the somatic tissues of descendants of an interspecific hybrid of setaria verticillata s. Foxtail millet, scientific name setaria italica synonym panicum italicum l. Setaria viridis green foxtail and its domesticated relative s. Foxtail millet setaria italica is attractive to plant scientists as a model plant because of several distinct characteristics, such as its short stature, rapid life cycle, sufficient seed production per plant, selfcompatibility, true diploid nature, high photosynthetic efficiency, small genome size, and tolerance to abiotic and biotic stress. Jan 14, 2020 a simple and robust agrobacteriummediated gene expression system in the c4 panicoid model crop, foxtail millet has been developed with up to 27 % transformation efficiency.
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